Package: FLAssess 2.6.3
![](https://github.com/flr/FLAssess/raw/HEAD/man/figures/logo.png)
FLAssess: Generic Classes and Methods for Stock Assessment Models
A generic set of classes for stock assessment models are provided here. Individual assessment packages should extend the basic classes.
Authors:
FLAssess_2.6.3.tar.gz
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FLAssess.pdf |FLAssess.html✨
FLAssess/json (API)
NEWS
# Install 'FLAssess' in R: |
install.packages('FLAssess', repos = c('https://flr.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/flr/flassess/issues
Last updated 2 years agofrom:03d018dbad. Checks:OK: 1 WARNING: 8. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 16 2024 |
R-4.5-win-x86_64 | WARNING | Aug 16 2024 |
R-4.5-linux-x86_64 | WARNING | Aug 16 2024 |
R-4.4-win-x86_64 | WARNING | Aug 16 2024 |
R-4.4-mac-x86_64 | WARNING | Aug 16 2024 |
R-4.4-mac-aarch64 | WARNING | Aug 16 2024 |
R-4.3-win-x86_64 | WARNING | Aug 16 2024 |
R-4.3-mac-x86_64 | WARNING | Aug 16 2024 |
R-4.3-mac-aarch64 | WARNING | Aug 16 2024 |
Exports:assessfittedFLAssessFLSepVPA.controlfmleharvestindex.hatindex.hat<-index.nameindex.name<-index.rangeindex.range<-index.resindex.res<-mergeplotSepVPAsummaryVPAZ
Dependencies:clicolorspacefansifarverFLCoreggplot2gluegtableisobanditeratorslabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Call an stock assessment model | assess assess,FLAssess-method assess-methods |
FLAssess dataset | ass |
FLAssess class and methods | +,FLAssess,FLStock-method +,FLStock,FLAssess-method FLAssess FLAssess,FLQuant-method FLAssess,missing-method FLAssess-class FLAssess-methods harvest,FLAssess,missing-method index.hat index.hat,FLAssess-method index.hat<- index.hat<-,FLAssess,FLQuants-method index.name index.name,FLAssess-method index.name<- index.name<-,FLAssess,character-method index.range index.range,FLAssess-method index.range<- index.range<-,FLAssess,list-method index.res index.res,FLAssess-method index.res<- index.res<-,FLAssess,FLQuants-method merge,FLStock,FLAssess-method plot,FLAssess,missing-method show,FLAssess-method summary,FLAssess-method units,FLAssess-method units<-,FLAssess,list-method update,FLAssess-method window,FLAssess-method |
Control class for FLSepVPA | FLSepVPA.control FLSepVPA.control-class |
Sets catch data if no discards | no.discards no.discards,FLStock-method no.discards-methods |
Plot method for FLAssess class | plot,FLAssess-methods |
Separable Virtual Population Analysis in FLR | assess,FLSepVPA.control-method SepVPA SepVPA,FLStock-method SepVPA-methods |
Virtual Population Analysis in FLR | FLVPA-class VPA VPA,FLStock-method VPA-methods |
Calculates total mortality | Z Z,FLStock-method Z-methods |