Package: FLXSA 2.6.6

Iago Mosqueira

FLXSA: eXtended Survivor Analysis for FLR

Calculates stock numbers and fishing mortality at age from commercial catch data and one or more indices of abundance suing the method in Darby and Flatman (1994) and Shepherd (1999).

Authors:Iago Mosqueira [cre], Laurence T. Kell [aut]

FLXSA_2.6.6.tar.gz
FLXSA_2.6.6.zip(r-4.5)FLXSA_2.6.6.zip(r-4.4)FLXSA_2.6.6.zip(r-4.3)
FLXSA_2.6.6.tgz(r-4.4-x86_64)FLXSA_2.6.6.tgz(r-4.4-arm64)FLXSA_2.6.6.tgz(r-4.3-x86_64)FLXSA_2.6.6.tgz(r-4.3-arm64)
FLXSA_2.6.6.tar.gz(r-4.5-noble)FLXSA_2.6.6.tar.gz(r-4.4-noble)
FLXSA_2.6.6.tgz(r-4.4-emscripten)FLXSA_2.6.6.tgz(r-4.3-emscripten)
FLXSA.pdf |FLXSA.html✨
FLXSA/json (API)
NEWS

# Install 'FLXSA' in R:

install.packages('FLXSA', repos = c('https://flr.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/flr/flxsa/issues

Uses libs:

c++– GNU Standard C++ Library v3

Datasets:

cod4.f.ref - FLXSA data sets
cod4.indices - FLXSA data sets
cod4.n.ref - FLXSA data sets
cod4.stock - FLXSA data sets
her4.f.ref - FLXSA data sets
her4.indices - FLXSA data sets
her4.n.ref - FLXSA data sets
her4.stock - FLXSA data sets
ple7a.f.ref - FLXSA data sets
ple7a.indices - FLXSA data sets
ple7a.n.ref - FLXSA data sets
ple7a.stock - FLXSA data sets

On CRAN:

4.06 score 2 stars 1 packages 95 scripts 10 exports 31 dependencies

Last updated 2 years agofrom:d5cfce1cfd. Checks:OK: 1 ERROR: 8. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 06 2024
R-4.5-win-x86_64	ERROR	Nov 06 2024
R-4.5-linux-x86_64	ERROR	Nov 06 2024
R-4.4-win-x86_64	ERROR	Nov 06 2024
R-4.4-mac-x86_64	ERROR	Nov 06 2024
R-4.4-mac-aarch64	ERROR	Nov 06 2024
R-4.3-win-x86_64	ERROR	Nov 06 2024
R-4.3-mac-x86_64	ERROR	Nov 06 2024
R-4.3-mac-aarch64	ERROR	Nov 06 2024

Exports:assess diagnostics FLXSA FLXSA.control is.FLXSA is.FLXSA.control rand show summary xsa.sa

Dependencies:cli colorspace fansi farver FLAssess FLCore ggplot2 glue gtable isoband iterators labeling lattice lifecycle magrittr MASS Matrix mgcv munsell nlme pillar pkgconfig R6 RColorBrewer rlang scales tibble utf8 vctrs viridisLite withr

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
FLXSA data sets	cod4 cod4.f.ref cod4.indices cod4.n.ref cod4.stock data her4 her4.f.ref her4.indices her4.n.ref her4.stock ple7a ple7a.f.ref ple7a.indices ple7a.n.ref ple7a.stock
XSA diagnostics	diagnostics diagnostics,FLXSA-method diagnostics-method
Create a new FLXSA object -run an XSA analysis-	FLXSA
Class FLXSA	FLXSA-class show,FLXSA-method
A class for FLXSA control options	FLXSA.control FLXSA.control-class
is.FLXSA	is.FLXSA is.FLXSA.control
rand	rand
An FLXSA estimator module for the mse package	xsa.sa