{ "_id": "6a4b76b0a6574ff277f9b680", "Package": "FLSRTMB", "Title": "FLSR in TMB", "Version": "1.1.7", "Authors@R": "c(\nperson(\"Henning\", \"Winker\", email = \"henning.winker@ec.europa.eu\",\nrole = c(\"aut\", \"cre\")),\nperson(\"European Union\", role = c(\"fnd\", \"cph\")),\nperson(\"Iago\", \"Mosqueira\", email = \"iago.mosqueira@wur.nl\",\nrole = c(\"aut\"), comment = c(ORCID = \"0000-0002-3252-0591\")),\nperson(c(\"Christoffer\",\"Moesgaard\"), \"Albertsen\",\nemail = \"cmoe@aqua.dtu.dk\", role = c(\"ctb\"),\ncomment = c(ORCID = \"0000-0003-0088-4363\"))\n)", "Description": "Estimates FLR spawner recruitment relationships in TMB", "License": "EUPL", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "Repository": "https://flr.r-universe.dev", "Date/Publication": "2026-03-26 12:48:19 UTC", "RemoteUrl": "https://github.com/flr/FLSRTMB", "RemoteRef": "HEAD", "RemoteSha": "cd351fe5a93514625d28df80713cc91b724a7415", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-07-06 09:17:43 UTC", "User": "root" }, "Author": "Henning Winker [aut, cre],\nEuropean Union [fnd, cph],\nIago Mosqueira [aut] (ORCID: ),\nChristoffer Moesgaard Albertsen [ctb] (ORCID:\n)", "Maintainer": "Henning Winker ", "_user": "flr", "_type": "src", "_file": "FLSRTMB_1.1.7.tar.gz", "_fileid": "https://r2.ropensci.org/36c84bbd98f4788a9f1981ca063627e8bc90b63ada3b0ea5b16a3f94c74ec83a", "_filesize": 186670, "_sha256": "36c84bbd98f4788a9f1981ca063627e8bc90b63ada3b0ea5b16a3f94c74ec83a", "_expires": "2026-10-14T09:34:38.000Z", "_created": "2026-07-06T09:17:43.000Z", "_published": "2026-07-06T09:34:39.994Z", "_jobs": [ { "job": 85336550185, "time": 200, "config": "linux-devel-arm64", "r": "4.7.0", "check": "WARNING", "artifact": "8104768506" }, { "job": 85336550211, "time": 199, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "8104767040" }, { "job": 85336550210, "time": 213, "config": "linux-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "8104773840" }, { "job": 85336550182, "time": 231, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "8104779716" }, { "job": 85336550202, "time": 185, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "8105072278" }, { "job": 85336550172, "time": 429, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "WARNING", "artifact": "8104914178" }, { "job": 85336550227, "time": 158, "config": "macos-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "8104932916" }, { "job": 85336550180, "time": 383, "config": "macos-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "8104903110" }, { "job": 85335834321, "time": 215, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8104685887" }, { "job": 85336550120, "time": 155, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8104749222" }, { "job": 85336550176, "time": 211, "config": "windows-devel", "r": "4.7.0", "check": "WARNING", "artifact": "8104771925" }, { "job": 85336550212, "time": 213, "config": "windows-oldrel", "r": "4.5.3", "check": "WARNING", "artifact": "8104772523" }, { "job": 85336550196, "time": 239, "config": "windows-release", "r": "4.6.1", "check": "WARNING", "artifact": "8104783193" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211", "_status": "success", "_upstream": "https://github.com/flr/FLSRTMB", "_commit": { "id": "cd351fe5a93514625d28df80713cc91b724a7415", "author": "Iago Mosqueira ", "committer": "Iago Mosqueira ", "message": "Dropped browsers\n", "time": 1774529299 }, "_maintainer": { "name": "Henning Winker", "email": "henning.winker@ec.europa.eu" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "ggplotFL", "role": "Depends" }, { "package": "FLCore", "version": ">= 2.6.16", "role": "Depends" }, { "package": "doFuture", "role": "Depends" }, { "package": "TMB", "role": "LinkingTo" }, { "package": "RcppEigen", "role": "LinkingTo" }, { "package": "methods", "role": "Imports" }, { "package": "TMB", "version": ">= 1.7.19", "role": "Imports" }, { "package": "progressr", "role": "Imports" }, { "package": "scales", "role": "Imports" } ], "_owner": "flr", "_selfowned": true, "_usedby": 1, "_updates": [ { "week": "2025-48", "n": 2 }, { "week": "2026-02", "n": 1 }, { "week": "2026-03", "n": 1 }, { "week": "2026-07", "n": 1 }, { "week": "2026-13", "n": 4 } ], "_tags": [], "_topics": [ "stock-recruit", "fisheries", "flr", "tmb", "ad", "cpp" ], "_stars": 1, "_contributors": [ { "user": "iagomosqueira", "count": 40, "uuid": 1029847 }, { "user": "henning-winker", "count": 33, "uuid": 15005753 }, { "user": "calbertsen", "count": 2, "uuid": 7665065 } ], "_userbio": { "uuid": 3429277, "type": "organization", "name": "FLR", "followers": 31 }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/FLSRTMB" }, "_devurl": "https://github.com/flr/flsrtmb", "_searchresults": 43, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/FLSRTMB.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_cranurl": false, "_exports": [ "blimprior", "bootstrapSR", "dprior", "from_logitd", "from_logits", "gm", "hsblim", "plot_bootstrapSR", "plotjitter", "plotsrs", "plotsrts", "productivity", "spr0y", "sprFy", "sprior", "srrjitter", "srrTMB", "to_logitd", "to_logits" ], "_help": [ { "page": "blimprior", "title": "blimprior plot Plots the bounds of the hockey-stick break-point", "topics": [ "blimprior" ] }, { "page": "bootstrapSR", "title": "Bootstrap fits of mutliple stock-recruits relationships", "topics": [ "bootstrapSR" ] }, { "page": "dprior", "title": "dprior plot Plots the logit prior distribution for depensation", "topics": [ "dprior" ] }, { "page": "from_logitd", "title": "from_logitd()", "topics": [ "from_logitd" ] }, { "page": "from_logits", "title": "from_logits()", "topics": [ "from_logits" ] }, { "page": "gm", "title": "gm()", "topics": [ "gm" ] }, { "page": "hsblim", "title": "hsblim()", "topics": [ "hsblim" ] }, { "page": "plotjitter", "title": "plots Jitter results", "topics": [ "plotjitter" ] }, { "page": "plotsrs", "title": "plotsrs based on plot(FLSRs) Plots FLSRs, i.e. multiple S-R relationships", "topics": [ "plotsrs" ] }, { "page": "plotsrts", "title": "Plots time series of observed and predicted recruitment", "topics": [ "plotsrts" ] }, { "page": "productivity", "title": "productivity()", "topics": [ "productivity" ] }, { "page": "spr0y", "title": "spr0y()", "topics": [ "spr0y" ] }, { "page": "sprFy", "title": "sprFy()", "topics": [ "sprFy" ] }, { "page": "sprior", "title": "sprior plot Plots the logit prior distribution for steepness", "topics": [ "sprior" ] }, { "page": "srrjitter", "title": "Jitter of S-R fits", "topics": [ "srrjitter" ] }, { "page": "srrTMB", "title": "Fits Stock Recruitment Relationships (SRR) in TMB", "topics": [ "srrTMB", "srrTMB,FLSR-method", "srrTMB,FLSRs-method" ] }, { "page": "to_logitd", "title": "to_logitd()", "topics": [ "to_logitd" ] }, { "page": "to_logits", "title": "to_logits()", "topics": [ "to_logits" ] } ], "_pkglogo": "https://github.com/flr/FLSRTMB/raw/HEAD/man/figures/logo.png", "_readme": "https://github.com/flr/FLSRTMB/raw/HEAD/README.md", "_rundeps": [ "cli", "codetools", "cowplot", "cpp11", "data.table", "digest", "doFuture", "farver", "FLCore", "foreach", "future", "future.apply", "ggplot2", "ggplotFL", "ggrepel", "globals", "glue", "gridExtra", "gtable", "isoband", "iterators", "labeling", "lattice", "lifecycle", "listenv", "MASS", "Matrix", "parallelly", "patchwork", "progressr", "R6", "RColorBrewer", "Rcpp", "RcppEigen", "rlang", "S7", "scales", "TMB", "vctrs", "viridisLite", "withr" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_score": 3.8095597146352675, "_indexed": true, "_nocasepkg": "flsrtmb", "_universes": [ "flr" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1.7", "date": "2026-07-06T09:20:28.000Z", "distro": "resolute", "arch": "aarch64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/37efc2cbd6087173c926db29d9c9269784efd7d6bdbf4bebc4d9fc0f015f141b", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.7.0", "os": "linux", "version": "1.1.7", "date": "2026-07-06T09:20:04.000Z", "distro": "resolute", "arch": "x86_64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/1c4b6091c6f96cb63a4b10977b17e9b1a547933d603a0a531664757f06c7f7ef", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.6.1", "os": "linux", "version": "1.1.7", "date": "2026-07-06T09:20:37.000Z", "distro": "resolute", "arch": "aarch64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/17b16cdfcc9b31f6f58e5ff64dea31adecd83f1d9e7538b907bb11dc8a0095fc", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.6.1", "os": "linux", "version": "1.1.7", "date": "2026-07-06T09:20:24.000Z", "distro": "resolute", "arch": "x86_64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/dc21055be89692c1e6f449bd998abede58bb1e8009c267acb698978b0e612570", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.5.3", "os": "mac", "version": "1.1.7", "date": "2026-07-06T09:32:40.000Z", "arch": "aarch64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/1a913ed089726ea3a24d1ee40d24660f0ab44fcdebc98497866eeda99de5b704", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.5.3", "os": "mac", "version": "1.1.7", "date": "2026-07-06T09:23:45.000Z", "arch": "x86_64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/064fad7f87d3555a7ef7466dccecb456da8dfad7b67ac2a327eb136eaaf27b75", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.6.1", "os": "mac", "version": "1.1.7", "date": "2026-07-06T09:27:20.000Z", "arch": "aarch64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/c58593fda20bded82333d7073a8fcb3afb98deb01b52c739d0a65d471ec28724", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.6.1", "os": "mac", "version": "1.1.7", "date": "2026-07-06T09:23:53.000Z", "arch": "x86_64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/142bba55bf3e28b8cc3abfbda0c5b2a1f6afabe977b2e6cc20fa8a3a806fb605", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.6.0", "os": "wasm", "version": "1.1.7", "date": "2026-07-06T09:20:54.000Z", "arch": "emscripten", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/127ad48f6c187dba910f4519a59d3dbe9762ce802dad088629354a18470640bf", "status": "success", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.7.0", "os": "win", "version": "1.1.7", "date": "2026-07-06T09:19:29.000Z", "arch": "x86_64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/9aaabfc2cfb54b971af756653d7a44220ec3bfda0ee62505499349ef5bcf61fb", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.5.3", "os": "win", "version": "1.1.7", "date": "2026-07-06T09:19:38.000Z", "arch": "x86_64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/6e78888d7eb79523582176ea28265455c68125322a9f3e77cbaa6362bd217528", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" }, { "r": "4.6.1", "os": "win", "version": "1.1.7", "date": "2026-07-06T09:19:36.000Z", "arch": "x86_64", "commit": "cd351fe5a93514625d28df80713cc91b724a7415", "fileid": "https://r2.ropensci.org/d5792e5504483c684d8e84412a747e9037e98d51febfed61c8b3aff374cf6907", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/28780822211" } ] }