{ "_id": "6ac2189f773a0037682c1e82", "Package": "ggplotFL", "Title": "Using ggplot2 in FLR", "Version": "2.7.2", "Authors@R": "c(\nperson(\"Iago\", \"Mosqueira\", email = \"iago.mosqueira@wur.nl\",\nrole = c(\"cre\", \"aut\"), comment=c(c(ORCID = \"0000-0002-3252-0591\"))),\nperson(\"Laurence T.\", \"Kell\", email = \"laurie.kell@iccat.int\", role = \"aut\"))", "Description": "Using ggplot2 for FLR. Provides (1) overloaded ggplot\nmethods for various FLR classes, (2) ggplot-based versions of\nstandard plots in the FLCore package, and (3) new geoms for\nusing FLR objects.", "License": "GPL-2", "VignetteBuilder": "knitr", "URL": "http://flr-project.org/ggplotFL", "BugReports": "https://github.com/flr/ggplotFL/issues", "Additional_repositories": "http://flr-project.org/R", "Collate": "'allGenerics.R' 'palette.R' 'geom.R' 'functions.R' 'ggplot.R'\n'plot.R' 'special.R'", "LazyLoad": "Yes", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "Repository": "https://flr.r-universe.dev", "Date/Publication": "2026-03-26 09:09:29 UTC", "RemoteUrl": "https://github.com/flr/ggplotFL", "RemoteRef": "HEAD", "RemoteSha": "05591556385ce0440deb0891fb5447884b02a268", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-04 08:58:34 UTC", "User": "root" }, "Author": "Iago Mosqueira [cre, aut] (ORCID:\n),\nLaurence T. Kell [aut]", "Maintainer": "Iago Mosqueira ", "_user": "flr", "_type": "src", "_file": "ggplotFL_2.7.2.tar.gz", "_fileid": "https://r2.ropensci.org/1809a0a12180ffc2b3a742b4e3d867ec4398b0b25c7851df252e8b6a1525efe6", "_filesize": 310665, "_sha256": "1809a0a12180ffc2b3a742b4e3d867ec4398b0b25c7851df252e8b6a1525efe6", "_expires": "2027-01-12T09:13:02.000Z", "_created": "2026-10-04T08:58:34.000Z", "_published": "2026-10-04T09:13:03.855Z", "_jobs": [ { "job": 111401969811, "time": 218, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "11299001847" }, { "job": 111401969786, "time": 226, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "11299106740" }, { "job": 111401969906, "time": 192, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "11298893217" }, { "job": 111401969782, "time": 194, "config": "macos-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "11298419342" }, { "job": 111401431170, "time": 205, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11298752035" }, { "job": 111401969831, "time": 88, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11299166377" }, { "job": 111401969868, "time": 200, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "11298702391" }, { "job": 111401969845, "time": 187, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "WARNING", "artifact": "11298463530" }, { "job": 111401969844, "time": 193, "config": "windows-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "11299545218" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896", "_status": "success", "_upstream": "https://github.com/flr/ggplotFL", "_commit": { "id": "05591556385ce0440deb0891fb5447884b02a268", "author": "Iago Mosqueira ", "committer": "Iago Mosqueira ", "message": "import(patchwork) to make it accessible to other pkgs\n", "time": 1774516169 }, "_maintainer": { "name": "Iago Mosqueira", "email": "iago.mosqueira@wur.nl", "login": "iagomosqueira", "description": "", "uuid": 1029847, "orcid": "0000-0002-3252-0591" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.0", "role": "Depends" }, { "package": "methods", "role": "Depends" }, { "package": "FLCore", "version": ">= 2.6.15", "role": "Depends" }, { "package": "ggplot2", "version": ">= 2.4.0", "role": "Depends" }, { "package": "ggrepel", "role": "Depends" }, { "package": "patchwork", "role": "Depends" }, { "package": "gridExtra", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "scales", "role": "Imports" }, { "package": "cowplot", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "flr", "_selfowned": true, "_usedby": 14, "_updates": [ { "week": "2025-44", "n": 1 }, { "week": "2025-49", "n": 1 }, { "week": "2026-03", "n": 1 }, { "week": "2026-05", "n": 1 }, { "week": "2026-13", "n": 3 } ], "_tags": [], "_topics": [ "visualization", "ggplot2", "fisheries", "flr" ], "_stars": 4, "_contributors": [ { "user": "iagomosqueira", "count": 309, "uuid": 1029847 }, { "user": "colinpmillar", "count": 1, "uuid": 1502848 }, { "user": "ejardim", "count": 1, "uuid": 389311 }, { "user": "niknikos", "count": 1, "uuid": 5740435 } ], "_userbio": { "uuid": 3429277, "type": "organization", "name": "FLR", "followers": 33 }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ggplotFL" }, "_devurl": "https://github.com/flr/ggplotfl", "_searchresults": 677, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/ggplotFL.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_cranurl": false, "_exports": [ "%+%", "cohcorrplot", "eqlabel", "flpalette", "flpalette_colours", "flpalette_grads", "geom_flpar", "geom_flquantiles", "geom_worm", "ggplot", "human_numbers", "integer_breaks", "label_flqs", "modlabel", "phasePlot", "plot", "plotKobe", "plotLengths", "plotListFLQuants", "plotRunstest", "plotXval", "pubpng", "scale_colour_flr", "scale_fill_flr", "stat_flquantiles", "total" ], "_help": [ { "page": "cohcorrplot-methods", "title": "cohcorrplot", "topics": [ "cohcorrplot", "cohcorrplot,FLCohort-method", "cohcorrplot,FLQuant-method" ] }, { "page": "labels", "title": "Functions create labels for FLSR models", "topics": [ "eqlabel", "modlabel" ] }, { "page": "flpalette", "title": "A high-contrast palette to use in ggplotFL", "topics": [ "flpalette", "flpalette_colours", "flpalette_grads", "scale_colour_flr" ] }, { "page": "geom_flpar", "title": "Horizontal lines for FLPar objects", "topics": [ "geom_flpar" ] }, { "page": "geom_flquantiles", "title": "Sampling quantiles", "topics": [ "geom_flquantiles", "stat_flquantiles" ] }, { "page": "geom_worm", "title": "A geom for adding worms to probability intervals from geom_flquantiles", "topics": [ "geom_worm" ] }, { "page": "ggplot", "title": "ggplot method for various FLR classes", "topics": [ "ggplot,FLComp-method", "ggplot,FLComps-method", "ggplot,FLPar-method", "ggplot,FLQuant-method", "ggplot,FLQuants-method" ] }, { "page": "human_numbers", "title": "A ggplot2 number formatter", "topics": [ "human_numbers" ] }, { "page": "integer_breaks", "title": "Shows integer values in a programmatic and scalable fashion.", "topics": [ "integer_breaks" ] }, { "page": "label_flqs", "title": "A ggplot2 labeller for FLQuants", "topics": [ "label_flqs" ] }, { "page": "plot", "title": "ggplot versions of FLR class plot() methods", "topics": [ "plot,FLBiol,missing-method", "plot,FLBiols,missing-method", "plot,FLIndex,missing-method", "plot,FLIndexBiomass,missing-method", "plot,FLIndices,missing-method", "plot,FLPar,missing-method", "plot,FLQuant,FLQuant-method", "plot,FLQuant,missing-method", "plot,FLQuantPoint,FLQuant-method", "plot,FLQuantPoint,FLQuants-method", "plot,FLQuantPoint,missing-method", "plot,FLQuants,FLPar-method", "plot,FLQuants,FLPars-method", "plot,FLQuants,missing-method", "plot,FLSR,missing-method", "plot,FLSRs,ANY-method", "plot,FLSRs,missing-method", "plot,FLStock,FLPar-method", "plot,FLStock,FLStock-method", "plot,FLStock,FLStocks,missing-method", "plot,FLStock,FLStocks-method", "plot,FLStock,missing-method", "plot,FLStocks,FLPar-method", "plot,FLStocks,missing-method" ] }, { "page": "plotKobe", "title": "Kobe plot of biomass and fishing mortality over MSY", "topics": [ "plotKobe" ] }, { "page": "plotRunstest", "title": "Plot the runs test result for one or more time series", "topics": [ "plotRunstest", "plotRunstest,FLQuant,FLQuant-method", "plotRunstest,FLQuants,FLQuants-method", "plotRunstest,FLQuants,missing-method" ] }, { "page": "plotXval", "title": "Plot of FLIndices cross-validation by retrospective hindcast", "topics": [ "plotXval" ] }, { "page": "pubpng", "title": "Output ggplot object to PNG files with good quality settings.", "topics": [ "pubpng" ] }, { "page": "scale_fill_flr", "title": "High contrast discrete and continuous palettes", "topics": [ "scale_fill_flr" ] } ], "_pkglogo": "https://github.com/flr/ggplotFL/raw/HEAD/man/figures/logo.png", "_readme": "https://github.com/flr/ggplotFL/raw/HEAD/README.md", "_rundeps": [ "cli", "cowplot", "cpp11", "data.table", "farver", "FLCore", "ggplot2", "ggrepel", "glue", "gridExtra", "gtable", "isoband", "iterators", "labeling", "lattice", "lifecycle", "MASS", "Matrix", "patchwork", "R6", "RColorBrewer", "Rcpp", "rlang", "S7", "scales", "vctrs", "viridisLite", "withr" ], "_vignettes": [ { "source": "ggplotFL.Rmd", "filename": "ggplotFL.html", "title": "ggplotFL", "author": "Iago Mosqueira (EC JRC) iago.mosqueira@ec.europa.eu", "engine": "knitr::rmarkdown", "headings": [ "Download" ], "created": "2013-08-21 11:27:10", "modified": "2018-06-13 07:32:41", "commits": 40 } ], "_score": 7.930959213802708, "_indexed": true, "_nocasepkg": "ggplotfl", "_universes": [ "flr", "iagomosqueira" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "2.7.2", "date": "2026-10-04T09:00:38.000Z", "distro": "resolute", "commit": "05591556385ce0440deb0891fb5447884b02a268", "fileid": "https://r2.ropensci.org/ed2e5827588aaac57c0132066c1b95b854ccec537542c17a5fc811a2d7e4f1b7", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896" }, { "r": "4.6.1", "os": "linux", "version": "2.7.2", "date": "2026-10-04T09:00:38.000Z", "distro": "resolute", "commit": "05591556385ce0440deb0891fb5447884b02a268", "fileid": "https://r2.ropensci.org/42352eb192bd591dc63965ee6da3a6ebfe374f221e6bfc2ac38e9e94851b5909", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896" }, { "r": "4.5.3", "os": "mac", "version": "2.7.2", "date": "2026-10-04T09:10:54.000Z", "commit": "05591556385ce0440deb0891fb5447884b02a268", "fileid": "https://r2.ropensci.org/11ace62b93cf03a3a348d7f3dbfab1aee98a466cc0d19dcee8038e95f55a0b38", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896" }, { "r": "4.6.1", "os": "mac", "version": "2.7.2", "date": "2026-10-04T09:09:44.000Z", "commit": "05591556385ce0440deb0891fb5447884b02a268", "fileid": "https://r2.ropensci.org/dbe312d53096065477dad41d0fe03e66f4f01a761d419741d2144ac9a72c56ae", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896" }, { "r": "4.6.0", "os": "wasm", "version": "2.7.2", "date": "2026-10-04T09:00:23.000Z", "commit": "05591556385ce0440deb0891fb5447884b02a268", "fileid": "https://r2.ropensci.org/5ce46a84a8cdfd34c8ad11e89bea0f9861b8f1e95cb3e2bf8da6f40ad3756914", "status": "success", "buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896" }, { "r": "4.7.0", "os": "win", "version": "2.7.2", "date": "2026-10-04T08:59:56.000Z", "commit": "05591556385ce0440deb0891fb5447884b02a268", "fileid": "https://r2.ropensci.org/22c03fd3efa35589092739536c51c9dbb0ca963c6e488aa603a42838fbdbda92", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896" }, { "r": "4.5.3", "os": "win", "version": "2.7.2", "date": "2026-10-04T08:59:49.000Z", "commit": "05591556385ce0440deb0891fb5447884b02a268", "fileid": "https://r2.ropensci.org/8b6ba0854505d5b6fe9464fe732756864e6a5d27767f2d875a4ec495e611e8d0", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896" }, { "r": "4.6.1", "os": "win", "version": "2.7.2", "date": "2026-10-04T08:59:48.000Z", "commit": "05591556385ce0440deb0891fb5447884b02a268", "fileid": "https://r2.ropensci.org/a72d9f4aece85db78f009fd1a094e2be4f4fb0f9dcdbfa7895fcea3a5fa92112", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/flr/actions/runs/37190465896" } ] }