Package: ggplotFL 2.7.0.9133

Iago Mosqueira

ggplotFL: Using ggplot2 in FLR

Using ggplot2 for FLR. Provides (1) overloaded ggplot methods for various FLR classes, (2) ggplot-based versions of standard plots in the FLCore package, and (3) new geoms for using FLR objects.

Authors:Iago Mosqueira [cre, aut], Laurence T. Kell [aut]

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ggplotFL.pdf |ggplotFL.html✨
ggplotFL/json (API)
NEWS

# Install 'ggplotFL' in R:
install.packages('ggplotFL', repos = c('https://flr.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/flr/ggplotfl/issues

On CRAN:

visualizationggplot2fisheriesflr

7.58 score 4 stars 12 packages 440 scripts 23 exports 35 dependencies

Last updated 10 months agofrom:a7b6aec3cd. Checks:OK: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 03 2024
R-4.5-winWARNINGNov 03 2024
R-4.5-linuxWARNINGNov 03 2024
R-4.4-winWARNINGNov 03 2024
R-4.4-macWARNINGNov 03 2024
R-4.3-winWARNINGNov 03 2024
R-4.3-macWARNINGNov 03 2024

Exports:%+%cohcorrploteqlabelflpaletteflpalette_coloursflpalette_gradsgeom_flpargeom_flquantilesgeom_wormggplothuman_numbersinteger_breakslabel_flqsmodlabelplotplotLengthsplotListFLQuantsplotRunstestplotXvalpubpngscale_colour_flrscale_fill_flrstat_flquantiles

Dependencies:clicolorspacecowplotdata.tablefansifarverFLCoreggplot2ggrepelgluegridExtragtableisobanditeratorslabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerRcpprlangscalestibbleutf8vctrsviridisLitewithr

ggplotFL

Iago Mosqueira (EC JRC) [email protected]

Rendered fromggplotFL.Rmdusingknitr::rmarkdownon Nov 03 2024.

Last update: 2018-06-13
Started: 2013-08-21

Readme and manuals

Help Manual

Help pageTopics
cohcorrplotcohcorrplot cohcorrplot,FLCohort-method cohcorrplot,FLQuant-method
Functions create labels for FLSR modelseqlabel modlabel
A high-contrast palette to use in ggplotFLflpalette flpalette_colours flpalette_grads scale_colour_flr
Horizontal lines for FLPar objectsgeom_flpar
Sampling quantilesgeom_flquantiles stat_flquantiles
A geom for adding worms to probability intervals from geom_flquantilesgeom_worm
ggplot method for various FLR classesggplot,FLComp-method ggplot,FLComps-method ggplot,FLPar-method ggplot,FLQuant-method ggplot,FLQuants-method
A ggplot2 number formatterhuman_numbers
Shows integer values in a programmatic and scalable fashion.integer_breaks
A ggplot2 labeller for FLQuantslabel_flqs
ggplot versions of FLR class plot() methodsplot,FLBiol,missing-method plot,FLBiols,missing-method plot,FLIndex,missing-method plot,FLIndexBiomass,missing-method plot,FLIndices,missing-method plot,FLPar,missing-method plot,FLQuant,FLQuant-method plot,FLQuant,missing-method plot,FLQuantPoint,FLQuant-method plot,FLQuantPoint,FLQuants-method plot,FLQuantPoint,missing-method plot,FLQuants,FLPar-method plot,FLQuants,FLPars-method plot,FLQuants,missing-method plot,FLSR,missing-method plot,FLSRs,ANY-method plot,FLSRs,missing-method plot,FLStock,FLPar-method plot,FLStock,FLStock-method plot,FLStock,FLStocks,missing-method plot,FLStock,FLStocks-method plot,FLStock,missing-method plot,FLStocks,FLPar-method plot,FLStocks,missing-method
Plot the runs test result for one or more time seriesplotRunstest plotRunstest,FLQuant,FLQuant-method plotRunstest,FLQuants,FLQuants-method plotRunstest,FLQuants,missing-method
Plot of FLIndices cross-validation by retrospective hindcastplotXval
Output ggplot object to PNG files with good quality settings.pubpng
High contrast discrete and continuous palettesscale_fill_flr